Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorHALXA_RS11245Not AvailablePositive2304617 - 230501214144.3
protein sorting system archaetidylserine decarboxylaseHALXA_RS11250Not AvailablePositive2305166 - 230596927902.1
catalaseHALXA_RS11255Not AvailablePositive2306359 - 230868086778.9
hypothetical proteinHALXA_RS11260Not AvailableNegative2308769 - 230912813381.9
helix-turn-helix domain-containing proteinHALXA_RS11265Not AvailableNegative2309217 - 230987925117.2
aaa family atpaseHALXA_RS11270Not AvailableNegative2310013 - 231225080269.3
hypothetical proteinHALXA_RS22680Not AvailablePositive2312383 - 23125175083.66
hypothetical proteinHALXA_RS11280Not AvailableNegative2312541 - 23127869041.57
duf5796 family proteinHALXA_RS11285Not AvailableNegative2312789 - 231328317877.2
shikimate kinaseHALXA_RS11290Not AvailablePositive2313503 - 231437530143.8

Displaying genes 2431 – 2440 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.