Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prka family serine protein kinaseHALXA_RS11140Not AvailablePositive2283348 - 228563386913.1
yeah/yhbh family proteinHALXA_RS11145Not AvailablePositive2285624 - 228695550585.6
spovr family proteinHALXA_RS11150Not AvailablePositive2286948 - 228898478918.0
heat repeat domain-containing proteinHALXA_RS11155Not AvailablePositive2289082 - 228977724368.7
secondary thiamine-phosphate synthase enzyme yjbqHALXA_RS11160Not AvailablePositive2289817 - 229021814269.4
glycerophosphodiester phosphodiesteraseHALXA_RS11165Not AvailableNegative2290220 - 229087923974.7
response regulatorHALXA_RS11170Not AvailablePositive2291124 - 229156716253.3
sdr family oxidoreductaseHALXA_RS11175Not AvailablePositive2291689 - 229241125142.1
hypothetical proteinHALXA_RS11180Not AvailableNegative2292428 - 229278112801.3
helix-turn-helix domain-containing proteinHALXA_RS11185Not AvailablePositive2292962 - 22932018602.41

Displaying genes 2411 – 2420 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.