Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS11090Not AvailableNegative2272263 - 227296124567.2
atp-binding proteinHALXA_RS11095Not AvailableNegative2273030 - 227408536382.7
hypothetical proteinHALXA_RS11100Not AvailablePositive2274160 - 227466917981.3
abc transporter permeaseHALXA_RS11105Not AvailableNegative2274741 - 227586839434.8
prsw family intramembrane metalloproteaseHALXA_RS11110Not AvailableNegative2275858 - 227768763557.3
abc transporter atp-binding proteinHALXA_RS11115Not AvailableNegative2277780 - 227875135459.4
winged helix-turn-helix transcriptional regulatorHALXA_RS11120Not AvailablePositive2279047 - 227945115056.1
upf0179 family proteinHALXA_RS11125Not AvailableNegative2279493 - 227993916139.7
duf5820 family proteinHALXA_RS11130Not AvailableNegative2280054 - 228046715798.2
prka family serine protein kinaseHALXA_RS11135Not AvailablePositive2281274 - 228334680486.1

Displaying genes 2401 – 2410 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.