Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-3b c(17)-methyltransferaseHALXA_RS11040Not AvailableNegative2258609 - 225948131569.3
cobalt-precorrin 5a hydrolaseHALXA_RS11045Not AvailableNegative2259478 - 226044334665.1
pqq-binding-like beta-propeller repeat proteinHALXA_RS11050Not AvailableNegative2260671 - 226205048699.6
hypothetical proteinHALXA_RS11055Not AvailableNegative2262295 - 2265525119866.0
hypothetical proteinHALXA_RS11060Not AvailableNegative2265525 - 226657137470.5
hypothetical proteinHALXA_RS11065Not AvailableNegative2266565 - 226705317531.2
hypothetical proteinHALXA_RS11070Not AvailableNegative2267031 - 226802035561.0
type ii secretion system f family proteinHALXA_RS11075Not AvailableNegative2268017 - 226975061420.8
type ii/iv secretion system atpase subunitHALXA_RS11080Not AvailableNegative2269754 - 227170668589.9
hypothetical proteinHALXA_RS11085Not AvailableNegative2271799 - 227226616589.7

Displaying genes 2391 – 2400 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.