Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction endonucleaseHALXA_RS10945Not AvailablePositive2238447 - 223999758369.4
dna-methyltransferaseHALXA_RS10950Not AvailableNegative2239994 - 224101939191.6
hypothetical proteinHALXA_RS10955Not AvailableNegative2241427 - 224201421604.8
winged helix-turn-helix domain-containing proteinHALXA_RS10960Not AvailableNegative2242899 - 224461764840.2
tyrosine-type recombinase/integraseHALXA_RS10965Not AvailablePositive2245080 - 224623143795.2
tyrosine-type recombinase/integraseHALXA_RS10970Not AvailableNegative2246232 - 224725139102.1
hypothetical proteinHALXA_RS10975Not AvailablePositive2247495 - 224795317164.1
hypothetical proteinHALXA_RS22365Not AvailablePositive2247950 - 22481025839.93
universal stress proteinHALXA_RS10980Not AvailableNegative2248161 - 224858014997.6
hypothetical proteinHALXA_RS10985Not AvailablePositive2248723 - 22489387792.87

Displaying genes 2371 – 2380 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.