Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2270 domain-containing proteinHALXA_RS10850Not AvailableNegative2220868 - 222157225892.5
abc transporter substrate-binding proteinHALXA_RS10855Not AvailablePositive2221694 - 222284243160.3
hypothetical proteinHALXA_RS22105Not AvailableNegative2222911 - 22230665008.91
sodium-dependent transporterHALXA_RS10860Not AvailablePositive2223105 - 222453249679.2
helix-turn-helix transcriptional regulatorHALXA_RS10865Not AvailableNegative2224717 - 222561333661.7
class i sam-dependent methyltransferaseHALXA_RS10870Not AvailablePositive2225765 - 222684738367.5
duf5798 family proteinHALXA_RS10875Not AvailablePositive2227044 - 222737311833.4
plp-dependent cysteine synthase family proteinHALXA_RS10880Not AvailablePositive2227618 - 222859835165.8
hypothetical proteinHALXA_RS10885Not AvailableNegative2228764 - 22289587174.42
coa-binding proteinHALXA_RS10890Not AvailableNegative2229113 - 222953215341.0

Displaying genes 2351 – 2360 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.