Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prefoldin subunit betaHALXA_RS10805Not AvailableNegative2212676 - 221306814291.2
hypothetical proteinHALXA_RS22100Not AvailablePositive2213236 - 221364914324.2
phosphatase pap2 family proteinHALXA_RS10815Not AvailableNegative2213755 - 221464833127.7
abc transporter substrate-binding proteinHALXA_RS10820Not AvailableNegative2214648 - 221664872592.9
ribonuclease p protein component 4HALXA_RS10825Not AvailablePositive2216825 - 221710310526.4
yhby family rna-binding proteinHALXA_RS10830Not AvailablePositive2217210 - 22174589080.64
mechanosensitive ion channel family proteinHALXA_RS10835Not AvailablePositive2217455 - 221840834629.4
lola family proteinHALXA_RS10840Not AvailableNegative2218437 - 221924929842.0
dmt family transporterHALXA_RS10845Not AvailableNegative2219333 - 222027132734.9
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive2220417 - 2220730Not Available

Displaying genes 2341 – 2350 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.