Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22090Not AvailablePositive2203737 - 22039106298.97
hypothetical proteinHALXA_RS10765Not AvailablePositive2203970 - 220468624588.0
hypothetical proteinHALXA_RS10770Not AvailablePositive2204683 - 220518918158.8
dna double-strand break repair atpase rad50HALXA_RS10775Not AvailableNegative2205223 - 2207907103196.0
dna double-strand break repair protein mre11HALXA_RS10780Not AvailableNegative2207904 - 220931050787.1
marr family transcriptional regulatorHALXA_RS10785Not AvailableNegative2209478 - 220974710155.7
proteasome-activating nucleotidase pan1HALXA_RS10790Not AvailablePositive2209871 - 221108845538.2
hypothetical proteinHALXA_RS22095Not AvailableNegative2211337 - 22114744812.05
gmp synthase subunit aHALXA_RS10795Not AvailablePositive2211570 - 221212420060.1
duf3194 domain-containing proteinHALXA_RS10800Not AvailableNegative2212409 - 22126759461.33

Displaying genes 2331 – 2340 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.