Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-binding domain-containing proteinHALXA_RS10570Not AvailablePositive2164646 - 216547628536.6
small ribosomal subunit rsm22 family proteinHALXA_RS10575Not AvailablePositive2165473 - 216705658461.5
substrate-binding domain-containing proteinHALXA_RS22085Not AvailablePositive2167694 - 216833223179.8
5'/3'-nucleotidase sureHALXA_RS10585Not AvailablePositive2168839 - 216966329249.6
selt/selw/selh family proteinHALXA_RS10590Not AvailablePositive2169742 - 21699728525.99
helix-turn-helix transcriptional regulatorHALXA_RS10595Not AvailablePositive2170182 - 217057714946.0
duf1328 family proteinHALXA_RS21055Not AvailablePositive2170964 - 21711104930.57
hypothetical proteinHALXA_RS10600Not AvailablePositive2171191 - 217156513445.2
twin-arginine translocation signal domain-containing proteinHALXA_RS10605Not AvailableNegative2171907 - 217220610611.3
Trna-alaNot AvailableNot AvailablePositive2172359 - 2172430Not Available

Displaying genes 2291 – 2300 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.