Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS21670Not AvailablePositive2154346 - 21545858197.27
3-phosphoshikimate 1-carboxyvinyltransferaseHALXA_RS10525Not AvailableNegative2154610 - 215590244557.4
tigr00341 family proteinHALXA_RS10530Not AvailablePositive2156029 - 215734547168.1
lola family proteinHALXA_RS10535Not AvailableNegative2157402 - 215859243310.8
m24 family metallopeptidaseHALXA_RS10540Not AvailablePositive2158725 - 215991242460.8
s1c family serine proteaseHALXA_RS10545Not AvailableNegative2159929 - 216102937625.4
nad(p)/fad-dependent oxidoreductaseHALXA_RS10550Not AvailableNegative2161136 - 216220338963.8
hypothetical proteinHALXA_RS10555Not AvailableNegative2162316 - 216270514670.8
lrp/asnc family transcriptional regulatorHALXA_RS10560Not AvailableNegative2163083 - 216357118414.8
gnat family n-acetyltransferaseHALXA_RS10565Not AvailableNegative2163765 - 216449627769.1

Displaying genes 2281 – 2290 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.