Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional regulator lrpa1HALXA_RS10475Not AvailableNegative2144159 - 214458715568.3
hypothetical proteinHALXA_RS10480Not AvailablePositive2144752 - 214507511503.1
double zinc ribbon domain-containing proteinHALXA_RS10485Not AvailableNegative2145177 - 214628639880.0
thiamine pyrophosphate-dependent enzymeHALXA_RS10490Not AvailableNegative2146456 - 214739134498.8
2-oxoacid:acceptor oxidoreductase subunit alphaHALXA_RS10495Not AvailableNegative2147394 - 214929569921.8
osmc family proteinHALXA_RS10500Not AvailablePositive2149591 - 215034326196.1
php domain-containing proteinHALXA_RS10505Not AvailableNegative2150368 - 215115029559.2
chorismate synthaseHALXA_RS10510Not AvailableNegative2151245 - 215239641683.1
hit family proteinHALXA_RS10515Not AvailablePositive2152516 - 215292615195.7
alkaline phosphatase family proteinHALXA_RS10520Not AvailableNegative2152932 - 215417645311.5

Displaying genes 2271 – 2280 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.