Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase subunit alphaHALXA_RS10375Not AvailableNegative2122485 - 2125907124599.0
nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing proteinHALXA_RS10380Not AvailableNegative2125904 - 212756558840.2
hypothetical proteinHALXA_RS10385Not AvailableNegative2127692 - 21278716309.64
peptide-methionine (s)-s-oxide reductase msraHALXA_RS10390Not AvailableNegative2127969 - 212850219931.5
2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate reductaseHALXA_RS10395Not AvailableNegative2128570 - 212923823799.8
hypothetical proteinHALXA_RS10400Not AvailablePositive2129369 - 213014227077.1
dmt family transporterHALXA_RS10405Not AvailableNegative2130259 - 213118231607.4
nitrous oxide reductase accessory protein noslHALXA_RS10410Not AvailableNegative2131271 - 213190322398.4
srpbcc family proteinHALXA_RS10415Not AvailableNegative2132024 - 213252118560.6
phosphate uptake regulator phouHALXA_RS10420Not AvailableNegative2132699 - 213369436444.6

Displaying genes 2251 – 2260 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.