Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobaltochelatase subunit cobnHALXA_RS10275Not AvailablePositive2102140 - 2106042143699.0
precorrin-8x methylmutaseHALXA_RS10280Not AvailablePositive2106035 - 210681427471.9
cobalt-precorrin-7 (c(5))-methyltransferaseHALXA_RS10285Not AvailablePositive2106811 - 210760828699.2
class i sam-dependent methyltransferaseHALXA_RS10290Not AvailableNegative2107683 - 210836925731.4
hypothetical proteinHALXA_RS10295Not AvailableNegative2108569 - 21087516879.72
duf1802 family proteinHALXA_RS10300Not AvailableNegative2108841 - 210940420857.1
cobyrinic acid a,c-diamide synthaseHALXA_RS10305Not AvailablePositive2109511 - 211082146297.8
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbitHALXA_RS10310Not AvailablePositive2110932 - 211151320671.0
cobalt-factor ii c(20)-methyltransferaseHALXA_RS10315Not AvailablePositive2111510 - 211237330869.5
cobalt-precorrin-4/precorrin-4 c(11)-methyltransferaseHALXA_RS10320Not AvailablePositive2112370 - 211336535143.7

Displaying genes 2231 – 2240 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.