Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class iii poly(r)-hydroxyalkanoic acid synthase subunit phacHALXA_RS10185Not AvailableNegative2082048 - 208369160714.8
poly(r)-hydroxyalkanoic acid synthase subunit phaeHALXA_RS10190Not AvailableNegative2083696 - 208425621435.2
hypothetical proteinHALXA_RS10195Not AvailableNegative2084329 - 208481417264.0
abrb/maze/spovt family dna-binding domain-containing proteinHALXA_RS10200Not AvailableNegative2084874 - 208518511457.4
maoc family dehydrataseHALXA_RS10205Not AvailablePositive2085428 - 208605722793.3
phosphomannomutaseHALXA_RS10210Not AvailablePositive2086154 - 208757249605.2
bmp family lipoproteinHALXA_RS10215Not AvailablePositive2087735 - 208879037167.9
abc transporter atp-binding proteinHALXA_RS10220Not AvailablePositive2088794 - 209049161202.9
abc transporter permeaseHALXA_RS10225Not AvailablePositive2090488 - 209175043411.7
abc transporter permeaseHALXA_RS10230Not AvailablePositive2091743 - 209287038702.2

Displaying genes 2211 – 2220 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.