Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc ribbon domain-containing proteinHALXA_RS10085Not AvailableNegative2066862 - 206798340612.1
mbl fold metallo-hydrolaseHALXA_RS10090Not AvailableNegative2068071 - 206879926177.1
transcription initiation factor iibHALXA_RS10095Not AvailablePositive2069104 - 207008136309.1
hypothetical proteinHALXA_RS10100Not AvailablePositive2070189 - 20703686771.03
upf0058 family proteinHALXA_RS10105Not AvailablePositive2070699 - 20709358594.04
duf555 domain-containing proteinHALXA_RS10110Not AvailableNegative2071046 - 207156119004.2
dna-3-methyladenine glycosylase family proteinHALXA_RS10115Not AvailablePositive2071755 - 207263632755.4
hypothetical proteinHALXA_RS10120Not AvailablePositive2072762 - 207308511287.8
hypothetical proteinHALXA_RS10125Not AvailableNegative2073122 - 20733949737.61
hypothetical proteinHALXA_RS10130Not AvailableNegative2073406 - 20736639246.92

Displaying genes 2191 – 2200 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.