Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22770Not AvailableNegative2056237 - 205675518715.1
hypothetical proteinHALXA_RS22775Not AvailablePositive2056856 - 205746721096.2
uracil-dna glycosylase family proteinHALXA_RS10045Not AvailableNegative2057503 - 205813523520.4
helix-turn-helix domain-containing proteinHALXA_RS10050Not AvailableNegative2058220 - 205910431277.9
metal-dependent hydrolaseHALXA_RS10055Not AvailablePositive2059280 - 205979217393.4
cox15/ctaa family proteinHALXA_RS10060Not AvailableNegative2059841 - 206071030819.0
m24 family metallopeptidaseHALXA_RS10065Not AvailablePositive2060855 - 206196740129.8
helix-turn-helix domain-containing proteinHALXA_RS10070Not AvailableNegative2062088 - 206272023530.0
dna topoisomerase vi subunit bHALXA_RS10075Not AvailablePositive2062980 - 206544890639.5
dna topoisomerase iv subunit aHALXA_RS10080Not AvailablePositive2065450 - 206654141524.8

Displaying genes 2181 – 2190 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.