Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS09995Not AvailablePositive2048538 - 204886411533.4
beta-ribofuranosylaminobenzene 5'-phosphate synthase family proteinHALXA_RS10000Not AvailablePositive2049033 - 205006735773.9
rad55 family atpaseHALXA_RS10005Not AvailablePositive2050124 - 205096030300.7
hypothetical proteinHALXA_RS10010Not AvailablePositive2051047 - 205189531172.1
hypothetical proteinHALXA_RS22075Not AvailablePositive2051892 - 205252722964.2
transcription factor sHALXA_RS10020Not AvailablePositive2052624 - 205294712048.6
plastocyanin/azurin family copper-binding proteinHALXA_RS10025Not AvailablePositive2053167 - 205394627801.6
duf5518 domain-containing proteinHALXA_RS10030Not AvailableNegative2053977 - 205439013609.8
dna polymerase ivHALXA_RS10035Not AvailablePositive2054502 - 205587549574.6
hypothetical proteinHALXA_RS22765Not AvailablePositive2056025 - 20561595378.04

Displaying genes 2171 – 2180 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.