Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pilinHALXA_RS09895Not AvailablePositive2028484 - 202895416024.3
cgcgg family rsam-modified ripp proteinHALXA_RS09900Not AvailableNegative2028991 - 202929311250.6
moad/this family proteinHALXA_RS09905Not AvailableNegative2029402 - 202982415780.1
hypothetical proteinHALXA_RS09910Not AvailablePositive2029913 - 203130449308.7
hypothetical proteinHALXA_RS09915Not AvailableNegative2031339 - 20316059592.0
hd domain-containing proteinHALXA_RS09920Not AvailablePositive2031895 - 203312445580.8
atp-dependent dna ligase ligaHALXA_RS09925Not AvailableNegative2033150 - 203485062196.6
hypothetical proteinHALXA_RS09930Not AvailablePositive2035011 - 203656457757.3
2-phospho-l-lactate transferaseHALXA_RS09935Not AvailablePositive2036665 - 203765735123.8
pp_02019HALXA_RS09940Not AvailablePositive2037659 - 2038417Not Available

Displaying genes 2151 – 2160 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.