Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lvivd repeat-containing proteinHALXA_RS09460Not AvailablePositive1934780 - 193633655448.5
ppox class f420-dependent oxidoreductaseHALXA_RS09465Not AvailableNegative1936380 - 193681116308.5
leucine--trna ligaseHALXA_RS09470Not AvailablePositive1936965 - 1939613101263.0
halod1 output domain-containing proteinHALXA_RS09475Not AvailablePositive1939809 - 194010510251.5
duf420 domain-containing proteinHALXA_RS09480Not AvailablePositive1940183 - 194078521772.4
pyridoxamine 5'-phosphate oxidase family proteinHALXA_RS09485Not AvailablePositive1940852 - 194136418990.8
abc transporter permeaseHALXA_RS09490Not AvailableNegative1941393 - 194216627397.7
abc transporter atp-binding proteinHALXA_RS09495Not AvailableNegative1942163 - 194314634826.2
gnat family n-acetyltransferaseHALXA_RS09500Not AvailablePositive1943410 - 194455242509.7
tigr03557 family f420-dependent llm class oxidoreductaseHALXA_RS09505Not AvailablePositive1944616 - 194557835389.4

Displaying genes 2061 – 2070 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.