Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS09310Not AvailableNegative1903875 - 190434216220.4
manganese catalase family proteinHALXA_RS09315Not AvailablePositive1904514 - 190533830375.9
rimk family alpha-l-glutamate ligaseHALXA_RS09320Not AvailablePositive1905579 - 190692548157.8
prc-barrel domain-containing proteinHALXA_RS09325Not AvailablePositive1906987 - 19072449055.78
catalase/peroxidase hpiHALXA_RS09330Not AvailablePositive1907619 - 190975780021.3
hypothetical proteinHALXA_RS09335Not AvailableNegative1909957 - 191132751130.1
dna-3-methyladenine glycosylase family proteinHALXA_RS09340Not AvailableNegative1911645 - 191225623280.4
hypothetical proteinHALXA_RS09345Not AvailableNegative1912409 - 191303522642.8
hypothetical proteinHALXA_RS09350Not AvailableNegative1913035 - 191367623675.3
metal-dependent hydrolaseHALXA_RS09355Not AvailablePositive1913792 - 191439421266.2

Displaying genes 2031 – 2040 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.