Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinHALXA_RS09260Not AvailableNegative1895273 - 18954978166.71
xapx domain-containing proteinHALXA_RS09265Not AvailablePositive1895756 - 18959536947.83
hypothetical proteinHALXA_RS09270Not AvailableNegative1895999 - 18961846752.62
fad-binding proteinHALXA_RS09275Not AvailableNegative1896345 - 189818067024.7
succinate dehydrogenase/fumarate reductase iron-sulfur subunitHALXA_RS09280Not AvailableNegative1898190 - 189907133922.6
succinate dehydrogenaseHALXA_RS09285Not AvailableNegative1899073 - 189943813150.4
succinate dehydrogenase, cytochrome b556 subunitHALXA_RS09290Not AvailableNegative1899438 - 189986615514.0
succinylglutamate desuccinylase/aspartoacylase family proteinHALXA_RS09295Not AvailableNegative1900049 - 190115240273.9
gnat family n-acetyltransferaseHALXA_RS09300Not AvailablePositive1901315 - 190206427854.5
flippaseHALXA_RS09305Not AvailablePositive1902313 - 190378251989.8

Displaying genes 2021 – 2030 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.