Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinHALXA_RS09110Not AvailableNegative1862850 - 186332617725.2
trna (cytidine(56)-2'-o)-methyltransferaseHALXA_RS09115Not AvailablePositive1863473 - 186407522145.3
hypothetical proteinHALXA_RS09120Not AvailablePositive1864227 - 186615871541.3
tat pathway signal proteinHALXA_RS09125Not AvailablePositive1866185 - 186752548415.7
hypothetical proteinHALXA_RS09130Not AvailableNegative1867565 - 186828725983.9
amphi-trp domain-containing proteinHALXA_RS09135Not AvailablePositive1868373 - 186865110080.4
transcription factor eHALXA_RS09140Not AvailablePositive1868758 - 186928520489.7
duf2110 family proteinHALXA_RS09145Not AvailablePositive1869290 - 186996424586.6
duf5803 family proteinHALXA_RS09150Not AvailablePositive1869966 - 187073628393.8
chemotaxis protein chewHALXA_RS09155Not AvailableNegative1870767 - 187127318169.9

Displaying genes 1991 – 2000 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.