Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress proteinHALXA_RS09065Not AvailablePositive1856487 - 185693916409.2
hypothetical proteinHALXA_RS09070Not AvailablePositive1857234 - 185760514155.7
halod1 output domain-containing proteinHALXA_RS21035Not AvailableNegative1857627 - 185797712205.0
helix-turn-helix domain-containing proteinHALXA_RS09075Not AvailableNegative1858056 - 185870624608.9
duf2270 domain-containing proteinHALXA_RS09080Not AvailablePositive1858920 - 185963927305.4
halod1 output domain-containing proteinHALXA_RS09085Not AvailableNegative1859909 - 186021711366.1
hypothetical proteinHALXA_RS09090Not AvailableNegative1860487 - 186084613361.8
bacterio-opsin activator domain-containing proteinHALXA_RS09095Not AvailableNegative1860918 - 186157424448.5
hypothetical proteinHALXA_RS09100Not AvailableNegative1861979 - 18622279160.48
hypothetical proteinHALXA_RS09105Not AvailableNegative1862460 - 18626818487.34

Displaying genes 1981 – 1990 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.