Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS08870Not AvailablePositive1817708 - 18179026020.21
tyrosine--trna ligaseHALXA_RS08875Not AvailablePositive1817989 - 181897536727.8
hypothetical proteinHALXA_RS22060Not AvailableNegative1818982 - 18191526477.6
duf305 domain-containing proteinHALXA_RS08880Not AvailablePositive1819373 - 182002023479.4
biotin--[acetyl-coa-carboxylase] ligaseHALXA_RS08885Not AvailablePositive1820147 - 182108833377.8
hypothetical proteinHALXA_RS08890Not AvailableNegative1821244 - 18214989303.23
bacterio-opsin activator domain-containing proteinHALXA_RS08895Not AvailableNegative1821662 - 182232124360.5
universal stress proteinHALXA_RS08900Not AvailableNegative1822617 - 182309317032.0
nucleoside 2-deoxyribosyltransferaseHALXA_RS08905Not AvailableNegative1823238 - 182366015591.1
hd domain-containing proteinHALXA_RS08910Not AvailableNegative1823712 - 182440125085.1

Displaying genes 1941 – 1950 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.