Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinHALXA_RS08820Not AvailablePositive1806253 - 180662413550.9
aspartate--trna(asn) ligaseHALXA_RS08825Not AvailablePositive1806742 - 180804648665.6
cation:proton antiporterHALXA_RS08830Not AvailablePositive1808357 - 180959243374.4
universal stress proteinHALXA_RS08835Not AvailablePositive1809682 - 181013715823.5
hypothetical proteinHALXA_RS08840Not AvailableNegative1810184 - 181056413184.7
pantoate kinaseHALXA_RS08845Not AvailablePositive1810727 - 181156028497.5
yegp family proteinHALXA_RS08850Not AvailablePositive1811830 - 1814787108542.0
4-phosphopantoate--beta-alanine ligaseHALXA_RS08855Not AvailablePositive1814865 - 181564128173.8
arsenic resistance proteinHALXA_RS08860Not AvailableNegative1815694 - 181668635840.3
hypothetical proteinHALXA_RS08865Not AvailableNegative1816943 - 181758724188.2

Displaying genes 1931 – 1940 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.