Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mrna surveillance protein pelotaHALXA_RS08615Not AvailablePositive1765175 - 176624239839.3
hypothetical proteinHALXA_RS08620Not AvailablePositive1766351 - 176666211122.0
trmb family transcriptional regulatorHALXA_RS08625Not AvailableNegative1766717 - 176747828176.6
efflux rnd transporter permease subunitHALXA_RS08630Not AvailableNegative1767475 - 1770612111449.0
formyltransferase family proteinHALXA_RS08635Not AvailablePositive1770969 - 177192235736.0
mbl fold metallo-hydrolaseHALXA_RS08640Not AvailableNegative1771997 - 177273126880.4
bacteriorhodopsinHALXA_RS08645Not AvailableNegative1772904 - 177363525619.4
methyl-accepting chemotaxis proteinHALXA_RS08650Not AvailableNegative1773632 - 177532959037.2
cpbp family intramembrane glutamic endopeptidaseHALXA_RS08655Not AvailableNegative1775460 - 177613723428.3
atp-dependent helicaseHALXA_RS08660Not AvailablePositive1776301 - 1779078104377.0

Displaying genes 1891 – 1900 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.