Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shoct domain-containing proteinHALXA_RS08515Not AvailablePositive1745214 - 174578921103.3
monovalent cation/h(+) antiporter subunit gHALXA_RS08520Not AvailableNegative1745818 - 174621313724.6
monovalent cation/h+ antiporter complex subunit fHALXA_RS08525Not AvailableNegative1746210 - 174650310115.6
na+/h+ antiporter subunit eHALXA_RS08530Not AvailableNegative1746496 - 174716124184.8
na+/h+ antiporter subunit dHALXA_RS08535Not AvailableNegative1747161 - 174888859340.9
sodium:proton antiporterHALXA_RS08540Not AvailableNegative1748885 - 174924712710.7
mnhb domain-containing proteinHALXA_RS08545Not AvailableNegative1749244 - 174970816516.5
hydrogen gas-evolving membrane-bound hydrogenase subunit eHALXA_RS08550Not AvailableNegative1749830 - 175224484356.6
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3HALXA_RS08555Not AvailablePositive1752421 - 175409163701.3
glycoside hydrolase family 43 proteinHALXA_RS08560Not AvailableNegative1754126 - 175506735927.1

Displaying genes 1871 – 1880 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.