Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diphthine synthaseHALXA_RS08420Not AvailableNegative1725718 - 172649127825.5
rida family proteinHALXA_RS08425Not AvailableNegative1726540 - 172693513932.1
rieske (2fe-2s) proteinHALXA_RS08430Not AvailableNegative1726984 - 172740915269.4
class i sam-dependent methyltransferaseHALXA_RS08435Not AvailablePositive1727517 - 172856638912.9
Trna-thrNot AvailableNot AvailablePositive1728655 - 1728728Not Available
energy-coupling factor transporter transmembrane component t family proteinHALXA_RS08445Not AvailableNegative1729153 - 172985725060.1
energy-coupling factor abc transporter atp-binding proteinHALXA_RS08450Not AvailableNegative1729851 - 173057925856.6
biotin transporter bioyHALXA_RS08455Not AvailableNegative1730641 - 173122819955.1
cardb domain-containing proteinHALXA_RS08460Not AvailablePositive1731764 - 1736041146381.0
hypothetical proteinHALXA_RS08465Not AvailableNegative1736235 - 173652510354.7

Displaying genes 1851 – 1860 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.