Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biosynthetic-type acetolactate synthase large subunitHALXA_RS08370Not AvailablePositive1712121 - 171394464957.6
acetolactate synthase small subunitHALXA_RS08375Not AvailablePositive1713941 - 171463024832.8
ketol-acid reductoisomeraseHALXA_RS08380Not AvailablePositive1714623 - 171567238363.7
hypothetical proteinHALXA_RS08385Not AvailablePositive1715694 - 17159669637.58
3-isopropylmalate dehydratase large subunitHALXA_RS08390Not AvailablePositive1715963 - 171739052347.0
3-isopropylmalate dehydratase small subunitHALXA_RS08395Not AvailablePositive1717387 - 171802223410.0
vwa domain-containing proteinHALXA_RS08400Not AvailablePositive1718155 - 171991263522.5
s8 family serine peptidaseHALXA_RS08405Not AvailablePositive1719990 - 172237781719.0
isocitrate/isopropylmalate dehydrogenase family proteinHALXA_RS08410Not AvailablePositive1722439 - 172341934326.7
beta-glucosidase family proteinHALXA_RS08415Not AvailableNegative1723472 - 172558374253.9

Displaying genes 1841 – 1850 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.