Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidylyltransferase domain-containing proteinHALXA_RS08230Not AvailablePositive1685331 - 168599624608.7
fumarylacetoacetate hydrolase family proteinHALXA_RS08235Not AvailablePositive1685944 - 168667526638.1
udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolaseHALXA_RS08240Not AvailablePositive1686683 - 168769636765.9
methionyl-trna formyltransferaseHALXA_RS08245Not AvailablePositive1687693 - 168837025662.8
n-acetylneuraminate synthase family proteinHALXA_RS08250Not AvailableNegative1688372 - 168942138260.2
degt/dnrj/eryc1/strs family aminotransferaseHALXA_RS08255Not AvailableNegative1689451 - 169063844042.8
dtdp-glucose 4,6-dehydrataseHALXA_RS08260Not AvailableNegative1690642 - 169158934746.3
sdr family nad(p)-dependent oxidoreductaseHALXA_RS08265Not AvailableNegative1691586 - 169271341446.4
abc transporter atp-binding proteinHALXA_RS08270Not AvailableNegative1692799 - 169459866145.5
glutamine--fructose-6-phosphate transaminase (isomerizing)HALXA_RS08275Not AvailableNegative1694712 - 169651764255.1

Displaying genes 1811 – 1820 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.