Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferaseHALXA_RS08140Not AvailablePositive1661962 - 166298437394.1
sulfataseHALXA_RS08145Not AvailablePositive1663006 - 166436451720.8
glycosyltransferase family 2 proteinHALXA_RS08150Not AvailablePositive1664368 - 166531535660.7
plp-dependent cysteine synthase family proteinHALXA_RS08155Not AvailablePositive1665541 - 166662038620.1
asparagine synthase-related proteinHALXA_RS08160Not AvailablePositive1666718 - 166861671407.9
fkbm family methyltransferaseHALXA_RS08165Not AvailablePositive1668706 - 166957231682.1
polysaccharide biosynthesis c-terminal domain-containing proteinHALXA_RS08170Not AvailablePositive1669649 - 167106750174.0
utp--glucose-1-phosphate uridylyltransferase aglfHALXA_RS08175Not AvailablePositive1671118 - 167187928073.7
trmb family transcriptional regulatorHALXA_RS08180Not AvailableNegative1671883 - 167273732260.5
nad-dependent epimerase/dehydratase family proteinHALXA_RS08185Not AvailableNegative1672740 - 167373236660.6

Displaying genes 1791 – 1800 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.