Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide deacetylase family proteinHALXA_RS08035Not AvailablePositive1628277 - 162955446615.4
pin domain-containing proteinHALXA_RS08040Not AvailableNegative1629606 - 163000714927.3
abrb/maze/spovt family dna-binding domain-containing proteinHALXA_RS08045Not AvailableNegative1630011 - 16302779940.29
aldo/keto reductaseHALXA_RS08050Not AvailableNegative1630578 - 163158537871.6
hypothetical proteinHALXA_RS08055Not AvailableNegative1632094 - 163251615199.1
hypothetical proteinHALXA_RS08060Not AvailableNegative1632644 - 163307216502.1
hypothetical proteinHALXA_RS08065Not AvailablePositive1633337 - 163365111543.8
hypothetical proteinHALXA_RS08070Not AvailablePositive1633709 - 16339789064.36
glycosyltransferaseHALXA_RS20980Not AvailablePositive1634202 - 163502631687.7
tolb family proteinHALXA_RS20985Not AvailableNegative1635125 - 163638148459.1

Displaying genes 1761 – 1770 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.