Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS07985Not AvailableNegative1615112 - 161618536712.9
glycerol kinase glpkHALXA_RS07990Not AvailableNegative1616186 - 161772757009.7
anaerobic glycerol-3-phosphate dehydrogenase subunit glpaHALXA_RS07995Not AvailablePositive1618026 - 161975362716.1
glycerol-3-phosphate dehydrogenase subunit glpbHALXA_RS08000Not AvailablePositive1619755 - 162107746574.8
anaerobic glycerol-3-phosphate dehydrogenase subunit cHALXA_RS08005Not AvailablePositive1621166 - 162250649924.6
cdc6/cdc18 family proteinHALXA_RS08010Not AvailablePositive1622511 - 162369242646.8
hypothetical proteinHALXA_RS08015Not AvailablePositive1623790 - 162585975729.3
metal-dependent hydrolaseHALXA_RS08020Not AvailableNegative1626318 - 162682417769.8
nucleic acid-binding proteinHALXA_RS08025Not AvailableNegative1626817 - 162736819745.2
vanz family proteinHALXA_RS08030Not AvailableNegative1627453 - 162794417653.7

Displaying genes 1751 – 1760 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.