Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS07935Not AvailableNegative1606043 - 160633310278.5
iron-containing alcohol dehydrogenaseHALXA_RS07940Not AvailablePositive1606449 - 160764241560.5
hypothetical proteinHALXA_RS07945Not AvailablePositive1607756 - 160826218138.4
pyridoxamine 5'-phosphate oxidaseHALXA_RS07950Not AvailableNegative1608360 - 160882417846.9
had-iib family hydrolaseHALXA_RS07955Not AvailableNegative1608865 - 160955724931.8
abc transporter substrate-binding proteinHALXA_RS07960Not AvailablePositive1609924 - 161112944620.8
carbohydrate abc transporter permeaseHALXA_RS07965Not AvailablePositive1611132 - 161216637699.8
carbohydrate abc transporter permeaseHALXA_RS07970Not AvailablePositive1612171 - 161307332592.8
abc transporter atp-binding proteinHALXA_RS07975Not AvailablePositive1613076 - 161427243378.5
glycerophosphodiester phosphodiesteraseHALXA_RS07980Not AvailablePositive1614278 - 161504527517.6

Displaying genes 1741 – 1750 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.