Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
winged helix-turn-helix transcriptional regulatorHALXA_RS07885Not AvailableNegative1598163 - 159869620529.9
hypothetical proteinHALXA_RS07890Not AvailablePositive1598954 - 159930412510.3
3,4-dihydroxy-2-butanone-4-phosphate synthaseHALXA_RS07895Not AvailableNegative1599328 - 160007125934.5
duf120 domain-containing proteinHALXA_RS07900Not AvailableNegative1600068 - 160077526035.7
histidine kinaseHALXA_RS07905Not AvailableNegative1600961 - 160177629396.3
helix-turn-helix transcriptional regulatorHALXA_RS07910Not AvailablePositive1601905 - 160272930839.0
hypothetical proteinHALXA_RS07915Not AvailablePositive1602819 - 160315412414.8
4-demethylwyosine synthase tyw1HALXA_RS07920Not AvailableNegative1603220 - 160420037453.3
hypothetical proteinHALXA_RS07925Not AvailableNegative1604355 - 160482216514.0
helix-turn-helix transcriptional regulatorHALXA_RS07930Not AvailableNegative1605025 - 160583130863.6

Displaying genes 1731 – 1740 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.