Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
had family hydrolaseHALXA_RS07835Not AvailablePositive1590468 - 159118726046.1
class ii aldolase/adducin family proteinHALXA_RS07840Not AvailablePositive1591184 - 159184323390.2
nudix hydrolaseHALXA_RS07845Not AvailableNegative1591874 - 159237718471.4
orotate phosphoribosyltransferaseHALXA_RS07850Not AvailableNegative1592418 - 159295118962.1
alpha/beta hydrolaseHALXA_RS07855Not AvailablePositive1593084 - 159404635025.2
cdp-2,3-bis-(o-geranylgeranyl)-sn-glycerol synthaseHALXA_RS07860Not AvailableNegative1594128 - 159467319136.6
proline dehydrogenase family proteinHALXA_RS07865Not AvailablePositive1594866 - 159570831513.8
duf502 domain-containing proteinHALXA_RS07870Not AvailablePositive1595748 - 159643725168.3
doxx family membrane proteinHALXA_RS07875Not AvailableNegative1596453 - 159695318040.2
branched-chain amino acid transaminaseHALXA_RS07880Not AvailableNegative1597123 - 159805234706.2

Displaying genes 1721 – 1730 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.