Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinHALXA_RS07785Not AvailableNegative1579032 - 158020443072.2
serine/threonine-protein kinase rio2HALXA_RS07790Not AvailablePositive1580504 - 158141535305.3
abc transporter substrate-binding proteinHALXA_RS07795Not AvailablePositive1581711 - 158288344225.6
50s ribosomal protein l15eHALXA_RS07800Not AvailablePositive1583127 - 158371722716.9
universal stress proteinHALXA_RS07805Not AvailablePositive1583863 - 158429715529.9
phosphoribosyltransferase family proteinHALXA_RS07810Not AvailableNegative1584328 - 158504725852.4
helix-turn-helix domain-containing proteinHALXA_RS07815Not AvailableNegative1585140 - 158587727757.5
methyltransferase family proteinHALXA_RS07820Not AvailablePositive1586055 - 158668422478.9
hypothetical proteinHALXA_RS07825Not AvailableNegative1586681 - 158800048771.1
threonine--trna ligaseHALXA_RS07830Not AvailableNegative1588177 - 159012074564.0

Displaying genes 1711 – 1720 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.