Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permease subunitHALXA_RS07740Not AvailableNegative1570638 - 157143228665.2
abc transporter atp-binding proteinHALXA_RS07745Not AvailableNegative1571425 - 157244736978.1
class i sam-dependent methyltransferaseHALXA_RS07750Not AvailableNegative1572520 - 157334129851.5
deoxyribonuclease ivHALXA_RS07755Not AvailableNegative1573438 - 157430731593.3
biotin/lipoate a/b protein ligase family proteinHALXA_RS07760Not AvailableNegative1574387 - 157530733876.1
hypothetical proteinHALXA_RS22355Not AvailableNegative1575500 - 15756344674.17
nad-dependent epimerase/dehydratase family proteinHALXA_RS07765Not AvailableNegative1575683 - 157674138552.2
sugar phosphate isomerase/epimerase family proteinHALXA_RS07770Not AvailablePositive1576838 - 157761427863.3
heat repeat domain-containing proteinHALXA_RS07775Not AvailableNegative1577639 - 157869737363.5
hypothetical proteinHALXA_RS07780Not AvailableNegative1578764 - 15790399808.34

Displaying genes 1701 – 1710 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.