Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
double zinc ribbon domain-containing proteinHALXA_RS07690Not AvailablePositive1562693 - 156340326129.4
ribbon-helix-helix domain-containing proteinHALXA_RS07695Not AvailablePositive1563601 - 15637807006.17
cell division protein ftszHALXA_RS07700Not AvailablePositive1563783 - 156498242147.6
double zinc ribbon domain-containing proteinHALXA_RS07705Not AvailablePositive1565347 - 156574514496.5
trna 2-thiolation protein ncsaHALXA_RS07710Not AvailableNegative1565869 - 156683436131.9
hypothetical proteinHALXA_RS07715Not AvailablePositive1566982 - 156772526428.9
alpha/beta fold hydrolaseHALXA_RS07720Not AvailableNegative1567754 - 156848827184.6
hypothetical proteinHALXA_RS07725Not AvailablePositive1568611 - 156930625559.5
helix-turn-helix transcriptional regulatorHALXA_RS07730Not AvailableNegative1569319 - 156971714571.7
helix-turn-helix domain-containing proteinHALXA_RS07735Not AvailablePositive1569852 - 157054425587.6

Displaying genes 1691 – 1700 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.