Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseHALXA_RS07645Not AvailableNegative1555208 - 155624234517.5
gtp--adenosylcobinamide-phosphateguanylyl transferaseHALXA_RS07650Not AvailableNegative1556252 - 155684221086.0
adenosylcobinamide-gdp ribazoletransferaseHALXA_RS07655Not AvailableNegative1556842 - 155760925758.4
adenosylcobinamide-phosphate synthase cbibHALXA_RS07660Not AvailableNegative1557606 - 155860734193.6
had family hydrolaseHALXA_RS07665Not AvailableNegative1558675 - 155934923403.0
translation initiation factor if-2 subunit betaHALXA_RS07670Not AvailableNegative1559448 - 156005922624.2
hypothetical proteinHALXA_RS07675Not AvailableNegative1560169 - 156055514146.7
tigr03557 family f420-dependent llm class oxidoreductaseHALXA_RS07680Not AvailableNegative1560934 - 156196238412.6
hypothetical proteinHALXA_RS21655Not AvailableNegative1562011 - 15622237813.02
Trna-tyrNot AvailableNot AvailablePositive1562491 - 1562564Not Available

Displaying genes 1681 – 1690 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.