Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene desaturase family proteinHALXA_RS07595Not AvailableNegative1546314 - 154780155498.5
formate/nitrite transporter family proteinHALXA_RS07600Not AvailablePositive1548064 - 154995968799.0
translation initiation factor eif-1aHALXA_RS07605Not AvailableNegative1550411 - 155071911969.8
ykgj family cysteine cluster proteinHALXA_RS07610Not AvailableNegative1550821 - 155133619780.8
fumarylacetoacetate hydrolase family proteinHALXA_RS07615Not AvailableNegative1551390 - 155212126768.9
hypothetical proteinHALXA_RS07620Not AvailablePositive1552227 - 15524277028.68
hypothetical proteinHALXA_RS07625Not AvailableNegative1552515 - 15527247848.17
hypothetical proteinHALXA_RS07630Not AvailableNegative1552860 - 155331216592.9
adenosylcobinamide amidohydrolaseHALXA_RS07635Not AvailableNegative1553339 - 155416928315.2
threonine-phosphate decarboxylase cobdHALXA_RS07640Not AvailableNegative1554169 - 155521838507.7

Displaying genes 1671 – 1680 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.