Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseHALXA_RS07405Not AvailablePositive1510526 - 151131427844.1
cupin domain-containing proteinHALXA_RS07410Not AvailablePositive1511314 - 151170614789.2
fumarylacetoacetate hydrolase family proteinHALXA_RS07415Not AvailablePositive1511703 - 151253629663.9
threonine synthaseHALXA_RS07420Not AvailablePositive1512607 - 151381542968.0
metallophosphoesterase family proteinHALXA_RS07425Not AvailableNegative1513858 - 151451124379.1
hypothetical proteinHALXA_RS07430Not AvailableNegative1514957 - 151546618024.4
sugar phosphate isomerase/epimerase family proteinHALXA_RS07435Not AvailablePositive1515644 - 151638427231.2
hypothetical proteinHALXA_RS07440Not AvailablePositive1516583 - 15167988589.0
spermidine synthaseHALXA_RS07445Not AvailableNegative1516802 - 151851161031.1
hypothetical proteinHALXA_RS07450Not AvailableNegative1518640 - 15188677954.5

Displaying genes 1631 – 1640 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.