Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vms1/ankzf1 family peptidyl-trna hydrolaseHALXA_RS07355Not AvailablePositive1496828 - 149790739414.7
rod-determining factor rdfaHALXA_RS07360Not AvailableNegative1498153 - 149879123940.3
glycerate kinaseHALXA_RS07365Not AvailableNegative1499066 - 150042446209.4
mfs transporterHALXA_RS07370Not AvailableNegative1500533 - 150171141315.0
nadp-dependent malic enzymeHALXA_RS07375Not AvailableNegative1501875 - 150413081552.8
hypothetical proteinHALXA_RS07380Not AvailablePositive1504332 - 150483218027.5
m14 family zinc carboxypeptidaseHALXA_RS07385Not AvailableNegative1504950 - 150631151340.5
acyl-coa dehydrogenase family proteinHALXA_RS07390Not AvailablePositive1506507 - 150767341657.1
methylmalonyl-coa mutase family proteinHALXA_RS07395Not AvailablePositive1507812 - 150951863818.1
alpha/beta fold hydrolaseHALXA_RS07400Not AvailablePositive1509634 - 151043129019.5

Displaying genes 1621 – 1630 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.