Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2391 family proteinHALXA_RS07305Not AvailablePositive1487255 - 148774017118.3
gnat family n-acetyltransferaseHALXA_RS07310Not AvailableNegative1487737 - 148856430277.6
hypothetical proteinHALXA_RS07315Not AvailablePositive1488806 - 14890368371.21
hth-type transcriptional regulator lrpHALXA_RS07320Not AvailableNegative1489089 - 148955017029.5
hypoxanthine/guanine phosphoribosyltransferaseHALXA_RS07325Not AvailablePositive1489826 - 149038020135.9
uracil-xanthine permease family proteinHALXA_RS07330Not AvailablePositive1490564 - 149197647544.3
sdr family nad(p)-dependent oxidoreductaseHALXA_RS07335Not AvailableNegative1492031 - 149285829211.0
aldehyde dehydrogenase family proteinHALXA_RS07340Not AvailableNegative1492990 - 149448052998.2
helix-turn-helix transcriptional regulatorHALXA_RS07345Not AvailableNegative1494623 - 149543530161.8
dmt family transporterHALXA_RS07350Not AvailablePositive1495659 - 149665734189.8

Displaying genes 1611 – 1620 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.