Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidase family proteinHALXA_RS07250Not AvailableNegative1478510 - 147889314328.7
glycosyltransferaseHALXA_RS07255Not AvailableNegative1478965 - 147966925351.8
hypothetical proteinHALXA_RS07260Not AvailablePositive1479985 - 14802308682.7
base excision dna repair proteinHALXA_RS07265Not AvailablePositive1480429 - 148110024959.0
pectinesterase family proteinHALXA_RS07270Not AvailableNegative1481129 - 148206735134.1
duf2085 domain-containing proteinHALXA_RS07275Not AvailablePositive1482198 - 148263215318.0
tm2 domain-containing proteinHALXA_RS07280Not AvailablePositive1482693 - 148312415358.3
fad-dependent oxidoreductaseHALXA_RS07285Not AvailablePositive1483472 - 148481249132.9
sodium:calcium antiporterHALXA_RS07295Not AvailablePositive1485009 - 148634347372.5
hypothetical proteinHALXA_RS07300Not AvailablePositive1486368 - 148720129580.8

Displaying genes 1601 – 1610 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.