Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s28eHALXA_RS00160Not AvailableNegative35090 - 353147984.4
50s ribosomal protein l7aeHALXA_RS00165Not AvailableNegative35326 - 3568812578.5
ybjq family proteinHALXA_RS00170Not AvailableNegative35937 - 3626611399.3
trna(met) cytidine acetyltransferase tmcaHALXA_RS00175Not AvailablePositive36419 - 3871683507.0
hypothetical proteinHALXA_RS00180Not AvailableNegative38739 - 388764856.48
sdr family nad(p)-dependent oxidoreductaseHALXA_RS00185Not AvailableNegative39077 - 3981426750.6
duf456 domain-containing proteinHALXA_RS00190Not AvailablePositive39891 - 4037616150.1
carboxypeptidase regulatory-like domain-containing proteinHALXA_RS00195Not AvailablePositive40464 - 4136031001.1
plastocyanin/azurin family copper-binding proteinHALXA_RS00200Not AvailablePositive41532 - 4229626836.5
glutamate--trna ligaseHALXA_RS00205Not AvailableNegative42430 - 4415765615.4

Displaying genes 151 – 160 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.