Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5778 family proteinHALXA_RS07105Not AvailablePositive1449490 - 144989715074.0
transcription initiation factor iibHALXA_RS07110Not AvailablePositive1450082 - 145108036927.9
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelataseHALXA_RS07115Not AvailablePositive1451166 - 145182523258.2
glutamyl-trna reductaseHALXA_RS07120Not AvailablePositive1451822 - 145316847296.6
4a-hydroxytetrahydrobiopterin dehydrataseHALXA_RS07125Not AvailablePositive1453418 - 145370210860.3
lwr-salt proteinHALXA_RS07130Not AvailablePositive1453759 - 145414214065.1
had family hydrolaseHALXA_RS07135Not AvailablePositive1454232 - 145486123919.6
helix-turn-helix domain-containing proteinHALXA_RS07140Not AvailableNegative1454884 - 145555824616.4
molybdopterin biosynthesis proteinHALXA_RS07145Not AvailableNegative1455674 - 145754266141.5
mate family efflux transporterHALXA_RS07150Not AvailablePositive1457686 - 145914350265.6

Displaying genes 1571 – 1580 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.