Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:solute symporter family proteinHALXA_RS07055Not AvailableNegative1439555 - 144111455278.4
duf3311 domain-containing proteinHALXA_RS07060Not AvailableNegative1441111 - 14413779812.78
arsr/smtb family transcription factorHALXA_RS07065Not AvailablePositive1441592 - 144251230937.3
dna primase dnagHALXA_RS07070Not AvailablePositive1442624 - 144419254654.2
hypothetical proteinHALXA_RS07075Not AvailablePositive1444383 - 144467610112.3
hypothetical proteinHALXA_RS07080Not AvailableNegative1444659 - 144571734856.4
duf92 domain-containing proteinHALXA_RS07085Not AvailableNegative1445799 - 144714245099.4
undecaprenyl diphosphate synthase family proteinHALXA_RS07090Not AvailablePositive1447306 - 144793823948.1
hypothetical proteinHALXA_RS22465Not AvailableNegative1447970 - 144828411842.0
polyprenyl diphosphate synthaseHALXA_RS07100Not AvailableNegative1448352 - 144929336106.0

Displaying genes 1561 – 1570 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.