Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair protein mutsHALXA_RS07005Not AvailableNegative1425933 - 142861197444.8
globin-coupled sensor proteinHALXA_RS07010Not AvailableNegative1428699 - 143019854321.0
pp_01417HALXA_RS07015Not AvailableNegative1430455 - 1430781Not Available
llm class flavin-dependent oxidoreductaseHALXA_RS07020Not AvailableNegative1430863 - 143184636400.1
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseHALXA_RS07025Not AvailableNegative1431843 - 143323448550.6
air synthase family proteinHALXA_RS07030Not AvailableNegative1433343 - 143435335186.2
putative sulfate/molybdate transporterHALXA_RS07035Not AvailablePositive1434498 - 143559836077.7
dihydrodipicolinate synthase family proteinHALXA_RS07040Not AvailablePositive1435710 - 143659730819.8
dna mismatch repair endonuclease mutlHALXA_RS07045Not AvailablePositive1436594 - 143880778570.9
hypothetical proteinHALXA_RS07050Not AvailableNegative1438820 - 143947623148.0

Displaying genes 1551 – 1560 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.