Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS22015Not AvailableNegative1408767 - 14089165601.37
hypothetical proteinHALXA_RS06915Not AvailablePositive1409132 - 14093718575.92
chemotaxis protein chedHALXA_RS06920Not AvailablePositive1409553 - 141004416937.9
aminotransferase class v-fold plp-dependent enzymeHALXA_RS06925Not AvailablePositive1410272 - 141139039935.4
hypothetical proteinHALXA_RS22020Not AvailableNegative1411409 - 14115735960.08
hypothetical proteinHALXA_RS06930Not AvailableNegative1411641 - 141217119250.5
excinuclease abc subunit uvraHALXA_RS06935Not AvailablePositive1412361 - 1415327109814.0
class i sam-dependent methyltransferaseHALXA_RS06940Not AvailablePositive1415432 - 141621429643.4
wd40/yvtn/bnr-like repeat-containing proteinHALXA_RS06945Not AvailablePositive1416275 - 141731237694.9
hypothetical proteinHALXA_RS06950Not AvailableNegative1417349 - 141788217752.2

Displaying genes 1531 – 1540 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.